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Aliases : PGR3
Description : not classified
Gene families : OG0018185 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_36140.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_72 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0017038 | protein import | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:2001070 | starch binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 796 | 821 |
| IPR002885 | Pentatricopeptide_rpt | 900 | 926 |
| IPR002885 | Pentatricopeptide_rpt | 439 | 469 |
| IPR002885 | Pentatricopeptide_rpt | 334 | 363 |
| IPR033443 | PPR_long | 183 | 327 |
| IPR002885 | Pentatricopeptide_rpt | 823 | 872 |
| IPR002885 | Pentatricopeptide_rpt | 1068 | 1108 |
| IPR002885 | Pentatricopeptide_rpt | 612 | 659 |
| IPR002885 | Pentatricopeptide_rpt | 367 | 413 |
| IPR002885 | Pentatricopeptide_rpt | 541 | 588 |
| IPR002885 | Pentatricopeptide_rpt | 471 | 519 |
| IPR002885 | Pentatricopeptide_rpt | 998 | 1042 |
| IPR002885 | Pentatricopeptide_rpt | 928 | 976 |
| No external refs found! |