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  5. Lsat_1_v5_gn_2_35600.1

Lsat_1_v5_gn_2_35600.1 (HDA08, HDA8, ATHDA8)


Aliases : HDA08, HDA8, ATHDA8

Description : histone deacetylase *(HDA8). class-II histone deacetylase


Gene families : OG0043632 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_35600.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_23


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 35 327
No external refs found!