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  5. Lsat_1_v5_gn_2_33141.1

Lsat_1_v5_gn_2_33141.1 (HGML)


Aliases : HGML

Description : EC_4.1 carbon-carbon lyase. hydroxymethylglutaryl-CoA lyase


Gene families : OG0008896 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_33141.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_139


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034477 U6 snRNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000891 PYR_CT 114 387
No external refs found!