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  5. Lsat_1_v5_gn_2_20160.1

Lsat_1_v5_gn_2_20160.1 (EDT1, ATHDG11, HDG11, AtEDT1)


Aliases : EDT1, ATHDG11, HDG11, AtEDT1

Description : HD-ZIP IV-type transcription factor


Gene families : OG0044216 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_20160.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 238 460
IPR001356 Homeobox_dom 24 79
No external refs found!