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  5. Lsat_1_v5_gn_2_16921.1

Lsat_1_v5_gn_2_16921.1 (GTD1, HAF01, HAF1, HAC13, TAF1)


Aliases : GTD1, HAF01, HAF1, HAC13, TAF1

Description : not classified


Gene families : OG0000251 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_16921.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_173780.1 EMB2247 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 144 214
No external refs found!