Lsat_1_v5_gn_2_134460.1 (ATVLN4, VLN4)


Aliases : ATVLN4, VLN4

Description : acidic chitinase *(CHIA)


Gene families : OG0005365 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005365_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_134460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 236 408
IPR001223 Glyco_hydro18_cat 83 212
No external refs found!