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  5. Lsat_1_v5_gn_2_128460.1

Lsat_1_v5_gn_2_128460.1


Description : not classified


Gene families : OG0044804 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_128460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 347 370
IPR002885 Pentatricopeptide_rpt 209 237
IPR002885 Pentatricopeptide_rpt 315 337
IPR002885 Pentatricopeptide_rpt 450 471
IPR002885 Pentatricopeptide_rpt 48 72
IPR002885 Pentatricopeptide_rpt 77 102
IPR002885 Pentatricopeptide_rpt 479 508
IPR002885 Pentatricopeptide_rpt 180 205
IPR002885 Pentatricopeptide_rpt 514 542
IPR002885 Pentatricopeptide_rpt 551 575
IPR002885 Pentatricopeptide_rpt 239 266
IPR046848 E_motif 594 656
IPR002885 Pentatricopeptide_rpt 104 152
IPR002885 Pentatricopeptide_rpt 374 416
IPR032867 DYW_dom 692 784
No external refs found!