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  5. Lsat_1_v5_gn_2_123220.1

Lsat_1_v5_gn_2_123220.1


Description : not classified


Gene families : OG0003615 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_123220.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_169


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048364 root development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048731 system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140993 histone modifying activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 170 228
IPR001611 Leu-rich_rpt 48 106
No external refs found!