- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MEF9
Description : RNA editing factor *(MEF9)
Gene families : OG0044737 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_108000.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031072 | heat shock protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 363 | 409 |
| IPR002885 | Pentatricopeptide_rpt | 463 | 512 |
| IPR002885 | Pentatricopeptide_rpt | 330 | 359 |
| IPR002885 | Pentatricopeptide_rpt | 127 | 155 |
| IPR002885 | Pentatricopeptide_rpt | 304 | 328 |
| IPR002885 | Pentatricopeptide_rpt | 231 | 256 |
| IPR002885 | Pentatricopeptide_rpt | 69 | 97 |
| IPR002885 | Pentatricopeptide_rpt | 437 | 461 |
| IPR002885 | Pentatricopeptide_rpt | 162 | 190 |
| IPR002885 | Pentatricopeptide_rpt | 272 | 300 |
| IPR002885 | Pentatricopeptide_rpt | 541 | 563 |
| IPR046848 | E_motif | 581 | 642 |
| No external refs found! |