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  5. Lsat_1_v5_gn_2_102681.1

Lsat_1_v5_gn_2_102681.1 (EMB1649, DME)


Aliases : EMB1649, DME

Description : bifunctional DNA glycosylase/lyase *(ROS1). methylcytosine-specific DNA glycosylase *(ROS1)


Gene families : OG0003486 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_102681.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_194


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR028925 RRM_DME 1441 1541
IPR028924 Perm-CXXC 1407 1438
No external refs found!