Lsat_1_v5_gn_1_91860.1

Description : effector receptor *(NLR)

Gene families : OG0000030 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_91860.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
Lsat_1_v5_gn_1_101920.1	BURNOUT1	effector receptor *(NLR)	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_102180.1	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_66260.1	RLM3, TN16	effector receptor *(NLR)	0.07	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_95000.1	RLM3, TN16	effector receptor *(NLR)	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_98921.1	No alias	effector receptor *(NLR)	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004652	obsolete polynucleotide adenylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005216	monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022406	membrane docking	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043631	obsolete RNA polyadenylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048278	vesicle docking	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051259	protein complex oligomerization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051640	organelle localization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140056	organelle localization by membrane tethering	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	218	453
IPR002182	NB-ARC	1279	1514
IPR000157	TIR_dom	29	203
IPR045344	C-JID	985	1122

External Links

No external refs found!

Lsat_1_v5_gn_1_91860.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation