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Description : not classified
Gene families : OG0000166 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_85860.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_2_129340.1 | FRS12 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_3_123280.1 | TOP1BETA, TOP1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_8_31541.1 | PRMA | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004177 | aminopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006465 | signal peptide processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006473 | protein acetylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006873 | intracellular monoatomic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016407 | acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016573 | histone acetylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019725 | cellular homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030003 | intracellular monoatomic cation homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030026 | intracellular manganese ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042592 | homeostatic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043543 | protein acylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048878 | chemical homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055082 | intracellular chemical homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140993 | histone modifying activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |