Lsat_1_v5_gn_1_72241.1 (CTF18)

Aliases : CTF18

Description : not classified

Gene families : OG0039870 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_72241.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_160

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003896	DNA primase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006270	DNA replication initiation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006275	regulation of DNA replication	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031262	Ndc80 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032392	DNA geometric change	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032508	DNA duplex unwinding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034061	DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042555	MCM complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043086	negative regulation of catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044092	negative regulation of molecular function	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048478	obsolete replication fork protection	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051095	regulation of helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051097	negative regulation of helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070469	respirasome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0180019	Knl1/Spc105 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1905462	regulation of DNA duplex unwinding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1905463	negative regulation of DNA duplex unwinding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1905774	regulation of DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1905775	negative regulation of DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:2001251	negative regulation of chromosome organization	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	330	432

External Links

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Lsat_1_v5_gn_1_72241.1 (CTF18)

Expression Profile

Co-expression Networks

Functional Annotation