Lsat_1_v5_gn_1_64141.1

Description : not classified

Gene families : OG0009509 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_64141.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_138

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr3.04926	Nup98a, DRA2	nucleoporin of nuclear pore complex *(NUP98)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010921	regulation of phosphatase activity	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019902	phosphatase binding	None	Extended
MF	GO:0019903	protein phosphatase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	None	Extended
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007587	SAPS	358	492
IPR007587	SAPS	131	356

External Links

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Lsat_1_v5_gn_1_64141.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation