Lsat_1_v5_gn_1_61221.1 (AtHMP06)

Aliases : AtHMP06

Description : not classified

Gene families : OG0000233 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_61221.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_94

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_5_70821.1	AtHMP06	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005839	proteasome core complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010666	Znf_GRF	25	62

External Links

No external refs found!