1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_1_58901.1

Lsat_1_v5_gn_1_58901.1 (AT-EXP1, ATHEXP ALPHA...)


Aliases : AT-EXP1, ATHEXP ALPHA 1.2, EXP1, ATEXPA1, EXPA1, ATEXP1

Description : alpha-class expansin


Gene families : OG0001648 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_58901.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_21


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030410 nicotianamine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030417 nicotianamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030418 nicotianamine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072350 tricarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 55 140
IPR007117 Expansin_CBD 151 230
No external refs found!