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  5. Lsat_1_v5_gn_1_58301.1

Lsat_1_v5_gn_1_58301.1


Description : not classified


Gene families : OG0009456 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_58301.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_80


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004146 dihydrofolate reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006760 folic acid-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042558 pteridine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046653 tetrahydrofolate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 634 714
IPR011545 DEAD/DEAH_box_helicase_dom 228 383
IPR001650 Helicase_C 461 558
IPR011709 DEAD-box_helicase_OB_fold 793 873
No external refs found!