Lsat_1_v5_gn_1_49160.1 (PPR287)


Aliases : PPR287

Description : plastidial RNA processing factor *(PPR287)


Gene families : OG0008556 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_49160.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_203


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004455 ketol-acid reductoisomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 302 360
IPR002885 Pentatricopeptide_rpt 244 291
IPR002885 Pentatricopeptide_rpt 148 172
IPR002885 Pentatricopeptide_rpt 457 486
IPR002885 Pentatricopeptide_rpt 175 222
IPR002885 Pentatricopeptide_rpt 383 432
No external refs found!