Lsat_1_v5_gn_1_43720.1 (HPGT3)

Aliases : HPGT3

Description : hydroxyproline-O-galactosyltransferase *(HPGT). hydroxyproline-O-galactosyltransferase *(HPGT)

Gene families : OG0017353 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_43720.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_108

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006022	aminoglycan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006026	aminoglycan catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006030	chitin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006032	chitin catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR025298	DUF4094	35	111
IPR002659	Glyco_trans_31	145	337

External Links

No external refs found!

Lsat_1_v5_gn_1_43720.1 (HPGT3)

Expression Profile

Co-expression Networks

Functional Annotation