Lsat_1_v5_gn_1_42001.1

Description : borate transporter *(BOR)

Gene families : OG0001265 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_42001.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_15

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_3_122320.1	AtNPF5.2,...	not classified	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011531	HCO3_transpt-like_TM_dom	197	376
IPR011531	HCO3_transpt-like_TM_dom	8	181
IPR011531	HCO3_transpt-like_TM_dom	452	543

External Links

No external refs found!