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  5. Lsat_1_v5_gn_1_40460.1

Lsat_1_v5_gn_1_40460.1 (PGX3)


Aliases : PGX3

Description : EC_3.2 glycosylase. polygalacturonase *(PGX3-like)


Gene families : OG0017719 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_40460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_85


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 59 375
No external refs found!