Lsat_1_v5_gn_1_38881.1


Description : plant-specific E3 ubiquitin ligase *(RSL/RFA)


Gene families : OG0009440 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_38881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_41


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027370 Znf-RING_euk 78 124
IPR002867 IBR_dom 147 209
No external refs found!