Bra004392 (AT-EXP1, ATHEXP ALPHA...)


Aliases : AT-EXP1, ATHEXP ALPHA 1.2, EXP1, ATEXPA1, EXPA1, ATEXP1

Description : alpha-class expansin


Gene families : OG0004333 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004333_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra004392
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_214


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030410 nicotianamine synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030417 nicotianamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030418 nicotianamine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072350 tricarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 157 233
IPR009009 RlpA-like_DPBB 61 146
No external refs found!