Lsat_1_v5_gn_1_36740.1 (ELF7)

Aliases : ELF7

Description : component *(ELF7/PAF1) of PAF1C transcription initiation and elongation complex

Gene families : OG0000387 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_36740.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_200

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	None	Extended
BP	GO:0006368	transcription elongation by RNA polymerase II	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
CC	GO:0008023	transcription elongation factor complex	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016570	histone modification	IEA	Interproscan
CC	GO:0016593	Cdc73/Paf1 complex	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005956	protein kinase CK2 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030906	retromer, cargo-selective complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032940	secretion by cell	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034250	positive regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045905	positive regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140352	export from cell	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007133	RNA_pol_II-assoc_Paf1	25	348

External Links

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Lsat_1_v5_gn_1_36740.1 (ELF7)

Expression Profile

Co-expression Networks

Functional Annotation