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  5. Lsat_1_v5_gn_1_33720.1

Lsat_1_v5_gn_1_33720.1 (HTA8, H2A.Z)


Aliases : HTA8, H2A.Z

Description : histone *(H2A)


Gene families : OG0002435 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002435_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_33720.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_123


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 110 139
IPR007125 Histone_H2A/H2B/H3 20 108
No external refs found!