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  5. Lsat_1_v5_gn_1_31961.1

Lsat_1_v5_gn_1_31961.1


Description : deubiquitinase


Gene families : OG0002378 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_31961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_23


Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 18 152
No external refs found!