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  5. Lsat_1_v5_gn_1_27961.1

Lsat_1_v5_gn_1_27961.1 (DCA1, CLPC,...)


Aliases : DCA1, CLPC, ATHSP93-V, CLPC1, HSP93-V

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex


Gene families : OG0002168 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_27961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_52


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006788 heme oxidation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009976 tocopherol cyclase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042168 heme metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 784 864
IPR003959 ATPase_AAA_core 603 777
IPR004176 Clp_R_dom 72 124
IPR004176 Clp_R_dom 148 193
IPR003959 ATPase_AAA_core 266 382
IPR041546 ClpA/ClpB_AAA_lid 404 505
No external refs found!