1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_1_129260.1

Lsat_1_v5_gn_1_129260.1


Description : not classified


Gene families : OG0000043 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_129260.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_26720.1 Tudor1, TSN1, AtTudor1 mRNA endoribonuclease *(TSN) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_66900.1 TEB, POLQ not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_72121.1 MLK3, PPK4, AEL1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_94860.1 PEC1 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_53780.1 ATCIMS, METS1,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!