1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_1_126141.1

Lsat_1_v5_gn_1_126141.1 (GTD1, HAF01, HAF1, HAC13, TAF1)


Aliases : GTD1, HAF01, HAF1, HAC13, TAF1

Description : component *(HAF/TAF1) of TFIId basal transcription regulation complex. component *(HAF/TAF1) of SAGA transcription co-activator complex


Gene families : OG0001272 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_126141.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_6_102941.1 GTD1, HAF01,... component *(HAF/TAF1) of TFIId basal transcription... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022591 TAF1_HAT_dom 29 138
No external refs found!