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  5. Lsat_1_v5_gn_1_106881.1

Lsat_1_v5_gn_1_106881.1 (DEG9, OXS2, TZF7)


Aliases : DEG9, OXS2, TZF7

Description : regulatory factor *(TZF) of mRNA stress granule formation


Gene families : OG0009055 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_106881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004725 protein tyrosine phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006470 protein dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 300 320
IPR002110 Ankyrin_rpt 50 158
No external refs found!