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  5. Lsat_1_v5_gn_1_102421.1

Lsat_1_v5_gn_1_102421.1 (CHL11, CH-42, LOST1,...)


Aliases : CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1

Description : not classified


Gene families : OG0039857 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_102421.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_158


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!