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Bra004217


Description : CAMTA-type transcription factor


Gene families : OG0007227 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra004217
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_194


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004134 4-alpha-glucanotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046373 L-arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 658 730
IPR000048 IQ_motif_EF-hand-BS 862 882
IPR000048 IQ_motif_EF-hand-BS 839 858
IPR002909 IPT_dom 463 546
IPR005559 CG-1_dom 13 131
No external refs found!