1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_0_39101.1

Lsat_1_v5_gn_0_39101.1


Description : effector receptor *(NLR)


Gene families : OG0000044 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_0_39101.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_71441.1 PRLIP3 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_51501.1 No alias effector receptor *(NLR) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003883 CTP synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008172 S-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000157 TIR_dom 17 151
No external refs found!