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  5. Lsat_1_v5_gn_0_37300.1

Lsat_1_v5_gn_0_37300.1


Description : not classified


Gene families : OG0000182 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_0_37300.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_37320.1 PRX34, PRXCB,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_2_4341.1 anac095, NAC095 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022839 monoatomic ion gated channel activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 196 422
No external refs found!