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  5. Lsat_1_v5_gn_0_19800.1

Lsat_1_v5_gn_0_19800.1


Description : not classified


Gene families : OG0000075 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_0_19800.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_30981.1 LRRAC1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_118080.1 ALPHA-VPE, AEP1, ALPHAVPE not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003876 AMP deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032261 purine nucleotide salvage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032264 IMP salvage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043101 purine-containing compound salvage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043173 nucleotide salvage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0047623 adenosine-phosphate deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048364 root development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048731 system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0106380 purine ribonucleotide salvage IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 162 380
IPR041118 Rx_N 8 96
No external refs found!