1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_0_14981.1

Lsat_1_v5_gn_0_14981.1 (TRM11, AtTRM11)


Aliases : TRM11, AtTRM11

Description : not classified


Gene families : OG0000216 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_0_14981.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_86261.1 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_116521.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009512 cytochrome b6f complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030976 thiamine pyrophosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024752 Myb/SANT-like_dom 13 88
No external refs found!