Bra040987 (ZIG1, VTI11, ATVTI11,...)

Aliases : ZIG1, VTI11, ATVTI11, SGR4, ZIG, VTI1A, ATVTI1A, ITT3

Description : Qb-type VTI-group component of SNARE membrane fusion complex

Gene families : OG0002994 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002994_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra040987
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_90

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008915	lipid-A-disaccharide synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009245	lipid A biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046493	lipid A metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007705	Vesicle_trsprt_v-SNARE_N	12	90

External Links

No external refs found!

Bra040987 (ZIG1, VTI11, ATVTI11,...)

Expression Profile

Co-expression Networks

Functional Annotation