Aliases : RPOA
Description : component *(uS11c) of small plastid ribosomal-subunit proteome. core component *(RpoA) of plastid-encoded RNA polymerase
Gene families : OG0001994 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001994_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra040978 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_6 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0001510 | RNA methylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005634 | nucleus | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008170 | N-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0031167 | rRNA methylation | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0043227 | membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070475 | rRNA base methylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140110 | transcription regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |