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  5. Bra040920

Bra040920 (TPS21, ATTPS21)


Aliases : TPS21, ATTPS21

Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0008292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040920
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_140


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034220 monoatomic ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098655 monoatomic cation transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 224 489
IPR001906 Terpene_synth_N 17 192
No external refs found!