1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra040854

Bra040854 (PATL2)


Aliases : PATL2

Description : not classified


Gene families : OG0004144 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040854
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bra008012 PATL1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 436 593
IPR011074 CRAL/TRIO_N_dom 372 411
No external refs found!