Bra040843


Description : not classified


Gene families : OG0000277 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040843
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Bra040841 HRT, RPP8, RCY1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1990380 K48-linked deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 64
IPR002182 NB-ARC 328 398
No external refs found!