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  5. Bra039898

Bra039898 (AtVSR2, VSR1;2, VSR2, BP80-1;2)


Aliases : AtVSR2, VSR1;2, VSR2, BP80-1;2

Description : lytic vacuole protein sorting receptor *(VSR)


Gene families : OG0002826 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002826_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra039898
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Bra009645 AtVSR2, VSR1;2,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003137 PA_domain 114 215
No external refs found!