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Bra039787


Description : component *(uL11) of large ribosomal-subunit (LSU) proteome


Gene families : OG0000458 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra039787
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bra002460 RPL12C component *(uL11) of large ribosomal-subunit (LSU) proteome 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra003134 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.17 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra017204 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra023104 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_54400.1 RPL12C component *(uL11) of large ribosomal-subunit (LSU) proteome 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_1_64240.1 RPL12C component *(uL11) of large ribosomal-subunit (LSU) proteome 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_2_100021.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_45980.1 RPL12C component *(uL11) of large ribosomal-subunit (LSU) proteome 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.05117 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR020784 Ribosomal_uL11_N 13 69
IPR020783 Ribosomal_uL11_C 75 144
No external refs found!