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  5. Bra039648

Bra039648 (TUA2)


Aliases : TUA2

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer


Gene families : OG0000338 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra039648
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_113301.1 TUA2 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!