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Aliases : ATXR3, SDG2
Description : class-III histone methyltransferase *(Trx)
Gene families : OG0010827 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra039562 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005254 | chloride channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006820 | monoatomic anion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015267 | channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015698 | inorganic anion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043248 | proteasome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0060090 | molecular adaptor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |