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  5. Bra003893

Bra003893 (NPF5.11)


Aliases : NPF5.11

Description : anion transporter *(NRT1/PTR)


Gene families : OG0001530 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003893

Target Alias Description ECC score Gene Family Method Actions
Bra016085 NPF5.11 anion transporter *(NRT1/PTR) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004564 beta-fructofuranosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005199 structural constituent of cell wall IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005261 monoatomic cation channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000109 POT_fam 96 506
No external refs found!