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  5. Bra038920

Bra038920 (TPR5, SPAG)


Aliases : TPR5, SPAG

Description : polymerase-II assembly factor *(RPAP3)


Gene families : OG0013409 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra038920
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_28


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025986 RPAP3-like_C 353 442
IPR001440 TPR_1 82 109
No external refs found!