Bra038882 (GATA6)

Aliases : GATA6

Description : transcription factor *(A/B-GATA)

Gene families : OG0013989 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra038882
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016843	amine-lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016844	strictosidine synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	200	234

External Links

No external refs found!

Bra038882 (GATA6)

Expression Profile

Co-expression Networks

Functional Annotation