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  5. Bra038574

Bra038574


Description : component *(GID8) of GID ubiquitination complex


Gene families : OG0004050 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra038574
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_240


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005247 voltage-gated chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005253 monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005254 chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007062 sister chromatid cohesion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007064 mitotic sister chromatid cohesion IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 187 329
IPR006594 LisH 150 176
No external refs found!