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  5. Bra038166

Bra038166 (AtCRT1a, CRT1, CRT1a)


Aliases : AtCRT1a, CRT1, CRT1a

Description : ER luminal lectin chaperone *(CRT)


Gene families : OG0001212 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra038166
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_122580.1 CRT2, AtCRT1b, CRT1b ER luminal lectin chaperone *(CRT) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_122640.1 CRT2, AtCRT1b, CRT1b ER luminal lectin chaperone *(CRT) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01113 AtCRT1a, CRT1, CRT1a ER luminal lectin chaperone *(CRT) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001580 Calret/calnex 26 261
IPR001580 Calret/calnex 263 336
No external refs found!